Wikipedia:Wiki Ed/University of Michigan/CHEM 455 505 Special Topics in Biochemistry - Nucleic Acids Biochemistry E (Fall 2017)

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Course name
CHEM 455_505 Special Topics in Biochemistry - Nucleic Acids Biochemistry E
Institution
University of Michigan
Instructor
Nils Walter
Wikipedia Expert
Ian (Wiki Ed)
Subject
Chemistry
Course dates
2017-09-19 00:00:00 UTC – 2017-12-12 23:59:59 UTC
Approximate number of student editors
25


We now realize that the human genome contains at least 80,000 non-redundant non-coding RNA genes, outnumbering protein-coding genes by at least 4-fold, a revolutionary insight that has led some researchers to dub the eukaryotic cell an “RNA machine”. How exactly these ncRNAs guide every cellular function – from the maintenance and processing to the regulated expression of all genetic information – lies at the leading edge of the modern biosciences, from stem cell to cancer research. This course will provide an equally broad as deep overview of the structure, function and biology of DNA and particularly RNA. We will explore important examples from the current literature and the course content will evolve accordingly.

The class will be taught from a chemical/molecular perspective and will bring modern interdisciplinary concepts from biochemistry, biophysics and molecular biology to the fore.

Student Assigned Reviewing
Chiwenwu
LuigiAG User:Mjlink/sandbox, DCas9 Activation
Jacmeier HOXA11-AS1
Jfratzke BC200 lncRNA, User:Remerl/sandbox
Luttysar
Horrockssam User:Horrockssam/sandbox, RNA Interference
CHEM455 XPO5
Mjlink DCas9 Activation
Remerl BC200 lncRNA
Smithtyl
Ehentsch HOXA11-AS1
Esnayyan1996 RNA Interference, RNA Interference, Medicine, User:Horrockssam/sandbox
Richardwan27
Phutruong RNA origami
Foleyha TATA box
Chem455group4
Facevedo01 TATA box
Perescameron RNA Origami
Arjunponduri RNA origami
Colieato XPO5
Njasti DCas9 Activation
Tlefevre
Elizcarl Rolling Circle Replication
Rvwill
Juliaeisenberg BC200 lncRNA
Tanxt Rolling Circle Replication
Mabazzi8 RNA Interference, Medicine User:Horrockssam/sandbox
Chdle HOXA11-AS1

Timeline

Week 1

Course meetings
Tuesday, 19 September 2017   |   Thursday, 21 September 2017
In class - Wikipedia Essentials
  • Overview of the course
  • Introduction to how Wikipedia will be used in the course
  • Understanding Wikipedia as a community, we'll discuss its expectations and etiquette.
In class - Editing Basics
  • Basics of editing
  • Anatomy of Wikipedia articles, what makes a good article, how to distinguish between good and bad articles
  • Collaborating and engaging with the Wiki editing community
  • Tips on finding the best articles to work on for class assignments
In class - Exploring the topic area
  • Be prepared to discuss some of your observations about Wikipedia articles in your topic area that are missing or could use improvement.
In class - Using sources
  • Be prepared to explain close paraphrasing, plagiarism, and copyright violations on Wikipedia.



In class - Using images
  • Demo uploading images and adding images to articles.
  • Share experiences and discuss problems.



Assignment - Practicing the basics
  • Create an account and then complete the online training for students. During this training, you will make edits in a sandbox and learn the basic rules of Wikipedia.
  • Create a User page.
  • To practice editing and communicating on Wikipedia, introduce yourself on the user talk page of one of your classmates, who should also be enrolled in the table at the bottom of the page.
  • Explore topics related to your topic area to get a feel for how Wikipedia is organized. What areas seem to be missing? As you explore, make a mental note of articles that seem like good candidates for improvement.



Assignment - Select potential topics

Please work in groups of four to five (4-5) and choose three (3) potential topics to edit; for each potential topic write one paragraph to explain the changes you plan to make to an existing entry and why, or why this new topic should be included in Wikipedia. Your topic and explanation should be sent to Nils in a Word document by class time on Tue Sep 26. Selected topics for each group will be assigned within a few days.

Milestones

All students have Wikipedia user accounts and are listed on the course page.

Week 2

Course meetings
Tuesday, 26 September 2017   |   Thursday, 28 September 2017
Milestones
  • Each group will post their draft in the Sandbox on Wikipedia under their account and post a link to their Sandbox in the Article table on the Wikipedia Course Page. The explanation of changes you plan to make should also be posted to the Talk page of the Sandbox. This draft needs to be completed by class time on Tue Oct 10.
  • Begin working with classmates and other editors to polish your short starter article and fix any major issues.
  • Continue research in preparation for expanding your article.

Week 3

Course meetings
Tuesday, 3 October 2017   |   Thursday, 5 October 2017
Milestones

All students have started editing articles or drafts on Wikipedia.

Week 4

Course meetings
Tuesday, 10 October 2017   |   Thursday, 12 October 2017
Assignment - Complete first draft

Expand your article into a complete first draft.

Week 5

Course meetings
Tuesday, 17 October 2017   |   Thursday, 19 October 2017
Assignment - Peer review and copyedit
  • On the table at the bottom of this course page, add your username next to the article you are assigned to peer review.
  • Peer review the article assigned to you. Leave suggestions on the Sandbox talk pages according to the Peer Review Criteria listed in the assignment.
  • Copy-edit the reviewed articles.

Week 6

Course meetings
Tuesday, 24 October 2017   |   Thursday, 26 October 2017
Assignment - Respond to peer review
  • Make edits to your article based on peers’ feedback. If you disagree with a suggestion, use talk pages to politely discuss and come to a consensus on your edit.
Assignment - Prepare for in-class presentation
  • Prepare for an in-class presentation about your Wikipedia editing experience.
Milestones

Every student has finished reviewing their assigned articles, making sure that every article has been reviewed.

Week 7

Course meetings
Tuesday, 31 October 2017   |   Thursday, 2 November 2017
In class - In-class presentation

Each group is required to do a 5-min in-class presentation (worth 5 points) of their sandbox draft and their editing experiences in-class on Tue Oct 31 and Thu Nov 2.

In class - Moving articles to mainspace
  • We'll discuss moving your article out of your sandboxes and into Wikipedia's main space.
  • A general reminder: Don't panic if your contribution disappears, and don't try to force it back in.
    • Check to see if there is an explanation of the edit on the article's talk page. If not, (politely) ask why it was removed.
    • Contact your instructor or Wikipedia Content Expert and let them know.
Assignment - Move articles to mainspace
  • Move your sandbox articles into main space.
    • If you are expanding an existing article, copy your edit into the article. If you are making many small edits, save after each edit before you make the next one. Do NOT paste over the entire existing article, or large sections of the existing article.
    • If you are creating a new article, do NOT copy and paste your text, or there will be no record of your work history. Follow the instructions in the "Moving out of your sandbox" handout.
  • Begin expanding your article into a comprehensive treatment of the topic.

Week 8

Course meetings
Tuesday, 7 November 2017   |   Thursday, 9 November 2017
Assignment - Final article
  • Add final touches to your Wikipedia article.
  • Respond to other editors' suggestions or edits on your formal Wikipedia article.

Week 9

Course meetings
Tuesday, 14 November 2017   |   Thursday, 16 November 2017
Milestones

Students have finished all their work on Wikipedia that will be considered for grading.