File:HiCBinning.png

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Summary

Description
English: a) Sample Hi-C interaction matrix showing cis/trans interactions. b) Sample Hi-C interaction matrix showing genomic compartments along with the calculated compartment value, as given by first principal component analysis. c) Sample Hi-C interaction matrix, rotated by 45 degrees, showing topologically associating domains. Sample Hi-C data only shows 3 chromosomes for simplicity.
Date
Source (2015). The Hitchhiker’s guide to Hi-C analysis: practical guidelines. Methods 72, 65–75. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4347522/
Author Lajoie, B.R., Dekker, J., and Kaplan, N.

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Captions

Analysis and interpretation of Hi-C data

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15 January 2016

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